FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31408915
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA224500.06.1253194-95
ATCGGAA223250.05.968116394-95
AGCGTCG121800.05.9472894-95
AGATCGG253700.05.81349194-95
GTCGTGT104800.05.416296594-95
GCGTCGT106150.05.369787792-93
CGTCGTG109850.05.318643694-95
GAGCGTC158900.05.26119894-95
TAGATCG78900.05.237669594-95
AGAGCGT172050.05.107553594-95