FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17791848
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA114700.06.129292592-93
GATCGGA114500.06.11925592-93
TCGGAAG132300.05.61909794-95
AGATCGG129150.05.369560790-91
CGGAAGA145200.05.08716594-95
Produced by FastQC (version 0.11.5)