FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25046376
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA124800.05.78527594-95
GCGTCGT65250.05.678179394-95
AGCGTCG73000.05.5308494-95
TCGTGTA57700.05.515615594-95
ATCGGAA128350.05.45872494-95
TAGATCG47600.05.438567694-95
AGATCGG140850.05.328380694-95
Produced by FastQC (version 0.11.5)