FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6964815
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGATT14200.06.355580392-93
TAGATCG21450.05.646805392-93
AGCGTCG37150.05.56186594-95
GCGTCGT34350.05.25468794-95
GATCGGA61750.05.230725392-93
ATCGGAA60950.05.22144992-93
Produced by FastQC (version 0.11.5)