FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765141

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765141
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6621938
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCGCG1950.004447525414.6237351
CTATCGG3950.0033251686.6137866-67
GATCGGA67800.05.5695994-95
AGATCGG74850.05.45748494-95
ACACGTC40700.05.36845494-95
Produced by FastQC (version 0.11.5)