FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765143

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765143
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7142610
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG23050.06.07907794-95
ATCGGAA68850.05.795112694-95
AGATCGG77750.05.773217794-95
CGTCCTA12301.1150405E-95.59950294-95
GATCGGA69800.05.54611394-95
TAACCGT5650.00383971965.46451342-43
TCGGAAG74000.05.006675294-95
Produced by FastQC (version 0.11.5)