FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7142610
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG23800.05.88755394-95
AGATCGG78050.05.811928794-95
ATCGGAA69150.05.73566994-95
GATCGGA70750.05.438114694-95
GCGTCGT37850.05.333506694-95
AGCGTCG40700.05.251796294-95
CGTCGTG38600.05.1068294-95
Produced by FastQC (version 0.11.5)