FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6991609
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT43250.06.0403594-95
ACGTCTG39000.05.90694194-95
GATCGGA69550.05.429445792-93
ACACGTC41150.05.425172392-93
CACACGT50300.05.240955492-93
AGATCGG77600.05.14165794-95
TCGGAAG76350.05.132517394-95
ATCGGAA68450.05.10034394-95
Produced by FastQC (version 0.11.5)