FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765148
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7041764
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG71650.05.50238494-95
AAGAGCG57900.05.33241394-95
TAGATCG22100.05.158315794-95
AGAGCGT50900.05.132558394-95
CGTCGTG35600.05.07017194-95
Produced by FastQC (version 0.11.5)