FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765151

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765151
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7137150
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTTCG8902.774741E-75.870669492-93
GATCGGA56900.05.46781794-95
AGATCGG62600.05.387272494-95
CGTTCGG8859.213094E-65.36712494-95
ATCGGAA56300.05.188617794-95
TAGATCG18203.6379788E-125.08918492-93
Produced by FastQC (version 0.11.5)