FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765158

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765158
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16876516
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG53400.05.559415394-95
GATCGGA154300.05.371894-95
GCGTCGT86800.05.335501794-95
CGTCGTG86450.05.247213494-95
AGATCGG171500.05.220806694-95
CGTGTAG87250.05.062984592-93
Produced by FastQC (version 0.11.5)