FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765162

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765162
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18025566
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA86100.05.737458794-95
GTCGTGT98350.05.409199794-95
CGTCGTG101000.05.31430594-95
AGATCGG203750.05.280316494-95
GCGTCGT100700.05.25938392-93
GATCGGA184350.05.178956594-95
TAGATCG58700.05.13836692-93
Produced by FastQC (version 0.11.5)