FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765167

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765167
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12270727
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG40300.05.77534394-95
GATCGGA115850.05.453086494-95
ATCGGAA113800.05.30088394-95
AGATCGG128150.05.059420694-95
Produced by FastQC (version 0.11.5)