FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765168

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765168
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12270727
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA116250.05.516085694-95
CGTCGTG61900.05.40989394-95
AGCGTCG69250.05.315842694-95
ATCGGAA114500.05.26851894-95
GCGTCGT62750.05.223066394-95
AGATCGG127150.05.19264594-95
GTCGTGT58950.05.076296394-95
Produced by FastQC (version 0.11.5)