FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765171

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765171
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14117572
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA191350.05.47349694-95
AGATCGG209650.05.35822594-95
TAGATCG64450.05.306329794-95
ATCGGAA184800.05.24339894-95
TCGGAAG193100.05.06721894-95
ACACGTC102700.05.04127994-95
Produced by FastQC (version 0.11.5)