FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15149656
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA227550.06.105692494-95
GATCGGA235900.05.98018294-95
AGATCGG259300.05.669490394-95
TCGGAAG234050.05.65200494-95
ACACGTC122900.05.546077394-95
TAGATCG77000.05.335944794-95
ACGTCTG108550.05.29470194-95
CACGTCT120050.05.24251494-95
CGGAAGA235850.05.206076694-95
CGTCTGA99150.05.10202794-95
Produced by FastQC (version 0.11.5)