FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12168214
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGTGT105000.06.355882694-95
AGCGTCG117850.06.025602394-95
TCGTGTA96200.05.999154694-95
GCGTCGT107750.05.99529494-95
TAGATCG69300.05.96313894-95
CGTCGTG105400.05.74590594-95
CGTGTAG97300.05.73606394-95
GATCGGA209700.05.640138694-95
GAGCGTC138750.05.631469794-95
ATCGGAA199550.05.569971694-95
AGAGCGT147400.05.5426894-95
AGATCGG230100.05.542638394-95
AAGAGCG163650.05.39865894-95
TCGGAAG207300.05.09823294-95
Produced by FastQC (version 0.11.5)