FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765177

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765177
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16657298
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA266700.05.993053494-95
GATCGGA276650.05.983540594-95
TAGATCG93000.05.950165794-95
CGTCTGA117550.05.73788594-95
AGATCGG302500.05.535028594-95
ACGTCTG129650.05.440515594-95
TCGGAAG271850.05.372814794-95
ACACGTC143100.05.32747694-95
CACGTCT144400.05.295961494-95
CGGAAGA274550.05.20752294-95
Produced by FastQC (version 0.11.5)