FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765179

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765179
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12544346
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA222350.06.034855494-95
CGTCTGA102300.05.664606694-95
GATCGGA228850.05.655892494-95
ACACGTC122400.05.588131494-95
ACGTCTG110600.05.51865994-95
TAGATCG72900.05.473149392-93
AGATCGG251600.05.276631492-93
TCGGAAG226300.05.100435794-95
CACACGT142300.05.073693894-95
CACGTCT121400.05.008144494-95
Produced by FastQC (version 0.11.5)