FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765181

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765181
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15506311
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA253100.05.66761294-95
TAGATCG85500.05.666558794-95
CGTCTGA107400.05.638859394-95
AGATCGG274900.05.632849794-95
ACACGTC129500.05.630201394-95
GTCACGA43950.05.565878494-95
ACGTCTG119500.05.485251494-95
ATCGGAA242900.05.485177594-95
CACGTCT133200.05.42031794-95
CACACGT153100.05.36730594-95
TCGGAAG251450.05.0436594-95
Produced by FastQC (version 0.11.5)