FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15561700
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC15801.2362052E-66.01345166
AGCGTCG114200.06.010232494-95
GCGTCGT102850.05.911465694-95
CGTCGTG101500.05.662508594-95
GATCGGA195950.05.648071394-95
ATCGGAA191600.05.553183694-95
AGAGCGT143850.05.316251894-95
TAGATCG63450.05.31515994-95
AGATCGG216000.05.28872394-95
GTCGTGT96650.05.234042694-95
AAGAGCG162200.05.18336794-95
TCGTGTA86450.05.164786394-95
GAGCGTC137750.05.120641794-95
Produced by FastQC (version 0.11.5)