FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765186

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765186
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13888289
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT95300.06.52931594-95
AGCGTCG103650.06.117883794-95
TAGATCG58550.06.003355594-95
GATCGGA184250.05.955163594-95
ATCGGAA175500.05.72430194-95
AGATCGG201050.05.611109794-95
CGTCGTG92350.05.47774794-95
GAGCGTC125850.05.39724494-95
CGTGTAG84100.05.25262294-95
AGAGCGT135000.05.154577794-95
TCGTGTA80850.05.052515592-93
GTTCGAC25950.05.033667692-93
AAGAGCG149950.05.020789694-95
Produced by FastQC (version 0.11.5)