FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765191

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765191
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8257567
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC75900.06.007780694-95
GATCGGA148550.05.80348194-95
AGATCGG161050.05.73645494-95
ACGTCTG67050.05.667295594-95
CGTACAA14451.2732926E-115.5881290-91
ACCGTAC17000.05.588119594-95
CGTCTGA60750.05.551325394-95
ATCGGAA142500.05.516552494-95
CACGTCT76400.05.47109194-95
CGGAAGA147450.05.42799994-95
TCGGAAG144600.05.387163692-93
CACACGT89100.05.277668594-95
TAGATCG51400.05.174989792-93
Produced by FastQC (version 0.11.5)