FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7567944
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCAACG13850.06.344621792-93
TAGATCG34450.05.997687392-93
GATCGGA99300.05.9792294-95
ATCGGAA95750.05.828850394-95
CAACGTA14204.3655746E-115.519241394-95
ACGCAAC14254.7293724E-115.49987692-93
CGGAAGA101750.05.415111594-95
TCGGAAG99350.05.3785994-95
AGATCGG106500.05.26279294-95
ACGTAAT11703.6437814E-75.074671794-95
Produced by FastQC (version 0.11.5)