FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7567944
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACGAC4150.0061101569.158244
GATCGGA99000.05.877434794-95
TCGGAAG98000.05.792002794-95
ATCGGAA95700.05.757487394-95
AGCGTCG55950.05.73047494-95
TAGATCG33100.05.524839494-95
AAGAGCG79500.05.466896594-95
CGTCGTG50600.05.4445894-95
GTCGTGT47800.05.415711494-95
CGGAAGA103300.05.37987894-95
CAACGGT14554.765752E-105.22328794-95
AGATCGG107900.05.21655594-95
TCGTGTA43100.05.12463194-95
GCGTCGT50100.05.119681494-95
GAGCGTC63950.05.05074394-95
Produced by FastQC (version 0.11.5)