FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8841094
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGATC14350.06.951101394-95
GTACGAT14100.06.737473594-95
CGTCTGA71100.05.979152794-95
ATCGGAA162000.05.96671994-95
TAGATCG58550.05.881624794-95
TCGGAAG164450.05.675640694-95
GATCGGA168950.05.580697594-95
AGATCGG183100.05.538545694-95
ACACGTC85550.05.524452794-95
GGTACGA16900.05.48067592-93
ACGTCTG76650.05.36031394-95
CACGTCT85350.05.259136794-95
CGGAAGA164400.05.07062594-95
Produced by FastQC (version 0.11.5)