FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8841094
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGTGT77550.06.094408594-95
TCGTGTA68950.06.02787294-95
AGCGTCG93700.06.00715894-95
ATCGGAA160150.05.976382394-95
GCGTCGT83900.05.94453194-95
CGTCGTG81150.05.824046694-95
TAGATCG56150.05.710107394-95
TCGGAAG164400.05.69186694-95
CGTGTAG70750.05.63953394-95
GATCGGA168050.05.554107794-95
AGAGCGT114650.05.46877694-95
AGATCGG183350.05.466279594-95
GAGCGTC108450.05.452932494-95
AAGAGCG128900.05.435373394-95
CGGAAGA164550.05.152649494-95
GTGTAGG83500.05.14816494-95
Produced by FastQC (version 0.11.5)