FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8498058
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA127900.05.570657394-95
GCACACG89600.05.539799794-95
CGTCTGA56650.05.49195794-95
ACACGTC65300.05.455490694-95
TCGGAAG130950.05.440909494-95
GATCGGA130900.05.424844794-95
CGGAAGA133350.05.342985694-95
AGATCGG143150.05.192885494-95
ACGTCTG60500.05.14246994-95
CACACGT78600.05.136675494-95
Produced by FastQC (version 0.11.5)