FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8498058
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG74800.07.23926594-95
GCGTCGT67100.06.795789794-95
CGTCGTG62800.06.202195694-95
AGAGCGT92900.05.85438192-93
TCGTGTA53950.05.766882492-93
GAGCGTC85950.05.719864494-95
ATCGGAA127200.05.582713694-95
CGTGTAG54950.05.57549394-95
GTCGTGT59800.05.44102494-95
AAGAGCG103150.05.4107894-95
GATCGGA132300.05.38545894-95
TAGATCG43250.05.27164894-95
AGATCGG143900.05.198894594-95
TCGGAAG132650.05.19220794-95
CGGAAGA137500.05.060881694-95
Produced by FastQC (version 0.11.5)