FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7971449
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA92650.06.587846894-95
AACGCAT8350.00592714136.2574116
TCGGAAG96800.06.109135694-95
GATCGGA95950.06.014743392-93
ACGATTG14201.8189894E-125.85376892-93
AGATCGG104300.05.85200492-93
TAGATCG32050.05.779927392-93
CGATTGG13954.6984496E-95.107434792-93
CACACGT63000.05.01379894-95
Produced by FastQC (version 0.11.5)