FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16343926
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT103350.06.020763494-95
CGTCGTG101100.05.75540294-95
GATCGGA196950.05.75205794-95
ATCGGAA191550.05.740630694-95
TAGATCG68400.05.590241494-95
AGCGTCG110350.05.50970694-95
AGATCGG216650.05.40441994-95
AGAGCGT142600.05.37952394-95
TCGGAAG203700.05.36324494-95
TCGTGTA85400.05.20049394-95
CGTGTAG89500.05.015330394-95
GAGCGTC132900.05.003729394-95
Produced by FastQC (version 0.11.5)