FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17015139
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG326800.06.09000494-95
GATCGGA298150.05.974231794-95
ATCGGAA285300.05.7854794-95
CGTCTGA127800.05.723681494-95
TAGATCG102950.05.651911394-95
TCGGAAG292000.05.5307294-95
ACGTCTG137350.05.446750694-95
ACACGTC150600.05.42486794-95
GCACACG198750.05.353360794-95
CACACGT180500.05.223588594-95
AAGATCG106800.05.00341994-95
Produced by FastQC (version 0.11.5)