FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17015139
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT152750.06.31253294-95
CGTCGTG146150.06.158843594-95
AGATCGG327000.06.064535694-95
AGCGTCG165150.05.967993394-95
GATCGGA299250.05.936442494-95
TCGTGTA123200.05.898879594-95
CGTGTAG124050.05.8584694-95
GTCGTGT136550.05.843948494-95
ATCGGAA285750.05.80964794-95
AGAGCGT206800.05.799621694-95
GAGCGTC192050.05.762758394-95
TAGATCG103150.05.594945494-95
TCGGAAG293500.05.47012794-95
AAGAGCG233450.05.32067494-95
CTACGGT32650.05.310048694-95
AAGATCG104500.05.13630794-95
Produced by FastQC (version 0.11.5)