FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27568893
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA460100.05.8896594-95
ATCGGAA446100.05.840237694-95
TAGATCG149750.05.772855394-95
AGATCGG503800.05.647480594-95
ACACGTC235550.05.636179494-95
TCGGAAG456400.05.4326494-95
CGTCTGA196350.05.3946194-95
ACGTCTG218300.05.31999594-95
CGGAAGA462100.05.309094494-95
CACACGT276850.05.20715294-95
CACGTCT239100.05.135314594-95
Produced by FastQC (version 0.11.5)