FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27568893
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA190700.06.052631494-95
GTCGTGT213400.06.032030694-95
CGTCGTG224700.05.971783694-95
TAGATCG152650.05.912149494-95
GCGTCGT231500.05.888701494-95
ATCGGAA445750.05.866169594-95
GATCGGA465100.05.86211394-95
AGCGTCG253650.05.82390394-95
CGTGTAG195550.05.65961394-95
AGATCGG507900.05.64400994-95
GAGCGTC299650.05.643185694-95
AGAGCGT318600.05.6206294-95
TCGGAAG456550.05.482907394-95
AAGAGCG359250.05.255681594-95
CGGAAGA463100.05.24637794-95
Produced by FastQC (version 0.11.5)