FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20630975
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG161200.05.981648494-95
GCGTCGT147750.05.80282794-95
AGATCGG318150.05.74056194-95
CGTGTAG127950.05.71702894-95
GAGCGTC191550.05.70342394-95
GATCGGA289600.05.666819694-95
TCGTGTA125650.05.65157192-93
ATCGGAA280150.05.47648494-95
TAGATCG97900.05.45832994-95
CGTCGTG143700.05.4209794-95
GTCGTGT138000.05.386729294-95
TCGGAAG292150.05.365348394-95
AGAGCGT204550.05.294503794-95
CGGAAGA301400.05.23220594-95
Produced by FastQC (version 0.11.5)