FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28068751
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG242800.06.10371694-95
TCGTGTA183050.06.033115494-95
GTCGTGT205650.05.94753494-95
GATCGGA439750.05.881396394-95
CGTCGTG213850.05.763901794-95
GCGTCGT221450.05.73768394-95
ATCGGAA422800.05.72959194-95
AGATCGG479800.05.687458594-95
GAGCGTC286000.05.522224494-95
TAGATCG142100.05.49870394-95
AGAGCGT303550.05.48461694-95
CGTGTAG189750.05.432082794-95
AAGAGCG339500.05.379538594-95
TCGGAAG433800.05.32151394-95
Produced by FastQC (version 0.11.5)