FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22010885
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG370050.05.756894694-95
TAGATCG114200.05.719035694-95
ATCGGAA326200.05.657092694-95
GATCGGA335250.05.61064394-95
CGTCTGA144800.05.33053894-95
CGCGTAT6300.0023926025.277687592-93
TCGGAAG336000.05.181087594-95
ACACGTC172900.05.05485994-95
CGGAAGA338900.05.03864394-95
Produced by FastQC (version 0.11.5)