FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22010885
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG184050.06.24552994-95
TCGTGTA138500.06.03604694-95
GCGTCGT168500.06.03258694-95
AGATCGG366550.05.75359794-95
AGAGCGT236250.05.740159594-95
TAGATCG112850.05.703315794-95
ATCGGAA323200.05.672906494-95
GAGCGTC221750.05.590704494-95
GATCGGA334700.05.58442894-95
GTCGTGT150600.05.551078394-95
AAGAGCG265800.05.539829794-95
CGTGTAG143200.05.3901494-95
CGTCGTG162650.05.344249294-95
TCGGAAG333700.05.20972294-95
Produced by FastQC (version 0.11.5)