FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23198853
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT209700.06.41031694-95
CGTCGTG201250.06.408042494-95
GTCGTGT190450.06.384845794-95
AGCGTCG226600.05.97415394-95
TCGTGTA170850.05.96353594-95
GATCGGA412600.05.80220194-95
AGAGCGT285400.05.691982794-95
GAGCGTC265050.05.689935794-95
ATCGGAA395700.05.6058694-95
CGTGTAG173350.05.56241894-95
AGATCGG450250.05.517462794-95
TAGATCG137200.05.487399694-95
AAGAGCG317350.05.433248594-95
TCGGAAG403600.05.2842994-95
CGGAAGA413550.05.22032294-95
ATCCGTA45650.05.202602494-95
Produced by FastQC (version 0.11.5)