FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7186491
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA73500.05.91312794-95
ATCGGAA72000.05.73944994-95
CGTCCTA12855.7480065E-105.54461794-95
CGTCTGA35650.05.529323694-95
TATCTCG9458.842071E-75.528970794-95
AGATCGG79250.05.45413194-95
Produced by FastQC (version 0.11.5)