FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7012230
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCGT51650.05.74777294-95
GCGTCGT34850.05.72448494-95
GATCGGA68800.05.488687594-95
ATCGGAA68350.05.455329494-95
TGACGAC11350.00403935745.44098579
TCGTGTA31000.05.362856494-95
CGTGTAG33400.05.261930594-95
AGCGTCG38150.05.167058594-95
AGATCGG75700.05.11389294-95
GTCGTGT34550.05.01804692-93
Produced by FastQC (version 0.11.5)