FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8704365
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA88950.05.39335194-95
ACACGTC52300.05.267561494-95
ATCGGAA88000.05.181695592-93
TAGATCG29650.05.046254692-93
TCGGAAG98000.05.040696694-95
Produced by FastQC (version 0.11.5)