FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765229

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765229
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7169743
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA55800.06.42684394-95
AGATCGG62200.05.841925694-95
CGGATAT10358.99714E-75.277672390-91
CGTTCGG9505.67439E-65.249895694-95
TAGATCG19650.05.19709888-89
CGTATGC6400.00291376845.195209594-95
ATCGGAA55450.05.139663794-95
Produced by FastQC (version 0.11.5)