FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14326323
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT96300.06.36286294-95
AGCGTCG106050.05.979428394-95
TCGTGTA81200.05.820444694-95
CGTCGTG92450.05.80578194-95
AGAGCGT135550.05.37895694-95
GTCGTGT88750.05.37881794-95
GATCGGA186900.05.375144594-95
CGTGTAG83800.05.35644894-95
AGATCGG204200.05.268676894-95
ATCGGAA183150.05.225853494-95
TAGATCG63450.05.20286294-95
GAGCGTC127550.05.064627694-95
Produced by FastQC (version 0.11.5)