FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18094115
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA89750.05.742300594-95
TAGATCG63800.05.43491694-95
AGATCGG207600.05.3883394-95
GCGTCGT103750.05.379481394-95
GATCGGA187850.05.360623494-95
CGTCGTG101050.05.14716994-95
GTCGTGT98000.05.1377294-95
CGTGTAG94450.05.079372494-95
ATCGGAA185300.05.049884394-95
Produced by FastQC (version 0.11.5)