FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14564987
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT94450.06.06001894-95
AGCGTCG102700.05.61946194-95
CGTCGTG92700.05.5851694-95
CGTGTAG86700.05.533387794-95
TCGTGTA84700.05.52384794-95
GATCGGA172950.05.479124594-95
ATCGGAA168850.05.34492294-95
AGATCGG191800.05.17590794-95
AAGAGCG149250.05.13980994-95
Produced by FastQC (version 0.11.5)