FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765246

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765246
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12313129
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG71350.05.92495894-95
TAGATCG38350.05.63553794-95
GCGTCGT66300.05.55235794-95
GTCGTGT62050.05.09060294-95
CGTCGTG65400.05.08404794-95
TCGTGTA56650.05.03084194-95
Produced by FastQC (version 0.11.5)