FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17963357
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT93250.05.501276594-95
GATCGGA171900.05.429692394-95
CGTCGTG93050.05.334435594-95
AGCGTCG100650.05.285581694-95
AGATCGG190600.05.28325494-95
GTCGTGT90250.05.105203694-95
TAGATCG59000.05.031720692-93
ATCGGAA168650.05.02736594-95
Produced by FastQC (version 0.11.5)