FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005765249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005765249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14177454
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA185800.05.751986594-95
AGATCGG211600.05.55572394-95
GATCGGA192300.05.4093694-95
TAGATCG65000.05.224848794-95
CACACGT125350.05.210260494-95
ACACGTC104300.05.14606494-95
TCGGAAG198200.05.14049294-95
Produced by FastQC (version 0.11.5)